6SH6
Crystal structure of the human DEAH-helicase DHX15 in complex with the NKRF G-patch bound to ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-22 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 0.999999 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 82.855, 91.212, 212.839 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.400 - 1.850 |
R-factor | 0.2055 |
Rwork | 0.203 |
R-free | 0.24430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xdr |
RMSD bond length | 0.010 |
RMSD bond angle | 1.042 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.400 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmeas | 0.148 | 4.220 |
Rpim | 0.040 | 1.130 |
Number of reflections | 68754 | 6760 |
<I/σ(I)> | 13.4 | 0.7 |
Completeness [%] | 99.9 | 98.9 |
Redundancy | 13.4 | 13.6 |
CC(1/2) | 0.999 | 0.387 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291.15 | 0.02 M 1,6-hexanediol, 0.02 M 1-butanol, 0.02 M (RS)-1,2-propanediol, 0.02 M 2-propanol, 0.02 M 1,4-butanediol, 0.02 M 1,3-propanediol, 0.1 M MES/imidazole pH 6.5, 10% w/v PEG 8000, 20% v/v ethylene glycol |