6RPN
Structure of metallo beta lactamase VIM-2 with cyclic boronate APC308.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E+ SUPERBRIGHT |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-03-08 |
| Detector | RIGAKU SATURN 944+ |
| Wavelength(s) | 1.54 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 101.081, 79.155, 67.746 |
| Unit cell angles | 90.00, 130.03, 90.00 |
Refinement procedure
| Resolution | 31.336 - 1.409 |
| R-factor | 0.1294 |
| Rwork | 0.129 |
| R-free | 0.15560 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4bz3 |
| Data reduction software | HKL-2000 (2.3.10) |
| Data scaling software | HKL-2000 (2.3.10) |
| Phasing software | PHASER (2.7.16) |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.460 |
| High resolution limit [Å] | 1.410 | 3.040 | 1.410 |
| Rmerge | 0.084 | 0.069 | 0.365 |
| Rmeas | 0.106 | 0.082 | 0.517 |
| Rpim | 0.063 | 0.044 | 0.365 |
| Total number of observations | 147264 | ||
| Number of reflections | 75121 | 7989 | 6682 |
| <I/σ(I)> | 14.4 | ||
| Completeness [%] | 95.5 | 99.9 | 85.1 |
| Redundancy | 2 | 3.5 | 1.4 |
| CC(1/2) | 0.990 | 0.725 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.25 | 298 | 0.2M Magnesium Chloride, 25% PEG 8000, 0.1M Tris Buffer |






