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6RIJ

CDK2/cyclin A2 in complex with open-ring 5-nitrosopyrimidine inhibitor LC436

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9184
Spacegroup nameC 1 2 1
Unit cell lengths72.310, 148.060, 162.960
Unit cell angles90.00, 90.51, 90.00
Refinement procedure
Resolution162.950 - 2.200
R-factor0.2052
Rwork0.203
R-free0.23760
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.587
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]162.950162.9502.260
High resolution limit [Å]2.2009.8402.200
Rmerge0.1010.0290.851
Rmeas0.1100.0320.943
Total number of observations507493
Number of reflections864459756379
<I/σ(I)>11.1334.161.95
Completeness [%]99.696.299.2
Redundancy5.8715.8015.364
CC(1/2)0.9980.9980.729
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529110% w/v PEG 4000, 20% v/v glycerol, 0.02 M sodium formate, 0.02 M ammonium acetate, 0.02 M trisodium citrate, 0.02 M sodium potassium L-tartrate, 0.02 M sodium oxamate, and 0.1 M MES/imidazole pH 6.5

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PDB entries from 2024-11-13

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