6RIJ
CDK2/cyclin A2 in complex with open-ring 5-nitrosopyrimidine inhibitor LC436
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 72.310, 148.060, 162.960 |
Unit cell angles | 90.00, 90.51, 90.00 |
Refinement procedure
Resolution | 162.950 - 2.200 |
R-factor | 0.2052 |
Rwork | 0.203 |
R-free | 0.23760 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.587 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 162.950 | 162.950 | 2.260 |
High resolution limit [Å] | 2.200 | 9.840 | 2.200 |
Rmerge | 0.101 | 0.029 | 0.851 |
Rmeas | 0.110 | 0.032 | 0.943 |
Total number of observations | 507493 | ||
Number of reflections | 86445 | 975 | 6379 |
<I/σ(I)> | 11.13 | 34.16 | 1.95 |
Completeness [%] | 99.6 | 96.2 | 99.2 |
Redundancy | 5.871 | 5.801 | 5.364 |
CC(1/2) | 0.998 | 0.998 | 0.729 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 10% w/v PEG 4000, 20% v/v glycerol, 0.02 M sodium formate, 0.02 M ammonium acetate, 0.02 M trisodium citrate, 0.02 M sodium potassium L-tartrate, 0.02 M sodium oxamate, and 0.1 M MES/imidazole pH 6.5 |