6QTK
2.31A structure of gepotidacin with S.aureus DNA gyrase and doubly nicked DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-09-28 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.8726 |
Spacegroup name | P 61 |
Unit cell lengths | 92.730, 92.730, 408.775 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.990 - 2.310 |
R-factor | 0.16421 |
Rwork | 0.163 |
R-free | 0.20347 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 2xcs |
RMSD bond length | 0.008 |
RMSD bond angle | 1.448 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.350 |
High resolution limit [Å] | 2.310 | 2.310 |
Number of reflections | 85905 | |
<I/σ(I)> | 19.2 | |
Completeness [%] | 99.7 | |
Redundancy | 5.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 293 | 11% PEG 5000MME, BisTris pH 6.2 |