6PKD
Myocilin OLF mutant N428D/D478H
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.547, 47.342, 97.076 |
Unit cell angles | 90.00, 100.20, 90.00 |
Refinement procedure
Resolution | 33.630 - 1.900 |
R-factor | 0.1834 |
Rwork | 0.182 |
R-free | 0.20810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 6ou2 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.880 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.144 | 0.075 | 0.496 |
Rmeas | 0.166 | 0.087 | 0.584 |
Rpim | 0.081 | 0.043 | 0.301 |
Total number of observations | 137258 | ||
Number of reflections | 33873 | 1780 | 1688 |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 98.6 | 98.5 | 96.6 |
Redundancy | 4.1 | 4 | 3.5 |
CC(1/2) | 0.993 | 0.666 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 289 | PEG 8000, MgCl2 |