6P88
E.coli LpxD in complex with compound 6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 96.966, 96.966, 215.872 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 78.262 - 1.700 |
R-factor | 0.1905 |
Rwork | 0.189 |
R-free | 0.21200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3eh0 |
Data reduction software | XDS |
Data scaling software | SCALA (0.7.2) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3211) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 78.260 | 78.260 | 1.730 |
High resolution limit [Å] | 1.700 | 9.310 | 1.700 |
Rmerge | 0.079 | 0.025 | 1.317 |
Rmeas | 0.085 | 0.027 | 1.408 |
Rpim | 0.029 | 0.009 | 0.491 |
Total number of observations | 987283 | 7223 | 52191 |
Number of reflections | 119674 | 922 | 6349 |
<I/σ(I)> | 15.4 | 46.3 | 1.5 |
Completeness [%] | 92.1 | 99.5 | 100 |
Redundancy | 8.2 | 7.8 | 8.2 |
CC(1/2) | 0.999 | 1.000 | 0.628 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 0.2M Mg formate, 20% PEG 3350 |