Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P67

Crystal Structure of a Complex of human IL-7Ralpha with an anti-IL-7Ralpha 2B8 Fab

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-09
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.03320
Spacegroup nameP 1 21 1
Unit cell lengths84.900, 219.680, 90.350
Unit cell angles90.00, 104.33, 90.00
Refinement procedure
Resolution43.770 - 2.900
R-factor0.2491
Rwork0.249
R-free0.26630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3di3 for IL-7R and 6P4Y for 2B8
RMSD bond length0.003
RMSD bond angle0.660
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarephenix.refine (1.16rc1_3535)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.004
High resolution limit [Å]2.9002.900
Rmeas0.196
Number of reflections703096971
<I/σ(I)>8.411.08
Completeness [%]99.298.72
Redundancy5.85.8
CC(1/2)0.9960.482
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529817% PEG 3350, 10% MPD, 0.2 lithium sulfate, 0.1 M imidazole pH 6.5, 20% glycerol

239492

PDB entries from 2025-07-30

PDB statisticsPDBj update infoContact PDBjnumon