6P3S
Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-04 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9787 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 135.480, 187.225, 342.366 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.460 - 4.000 |
R-factor | 0.283 |
Rwork | 0.281 |
R-free | 0.32600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xnq 4gsd |
RMSD bond length | 0.002 |
RMSD bond angle | 0.543 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.460 | 4.220 |
High resolution limit [Å] | 4.000 | 4.000 |
Rmerge | 0.210 | 0.625 |
Number of reflections | 74362 | 10717 |
<I/σ(I)> | 8.2 | |
Completeness [%] | 99.9 | |
Redundancy | 7.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 8% PEG 8000, 0.5 M Ca(OAC)2, 0.1 M imidazole |