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6NT2

type 1 PRMT in complex with the inhibitor GSK3368715

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2013-08-09
DetectorMARRESEARCH
Wavelength(s)1.0000
Spacegroup nameP 41 21 2
Unit cell lengths174.150, 174.150, 142.350
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.940 - 2.480
R-factor0.19183
Rwork0.190
R-free0.22169
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.196
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.9402.510
High resolution limit [Å]2.4802.480
Rmerge0.1790.961
Rmeas0.1891.013
Rpim0.0600.319
Number of reflections7777757208
<I/σ(I)>12.72.7
Completeness [%]100.0100
Redundancy9.910.1
CC(1/2)0.9960.810
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5291SAH and inhibitor were added to PRMT1 to a final concentration of 1.5mM each (3% DMSO). The complex was incubated at 4deg C before crystallization. 1uL protein-ligand complex was mixed with 1 uL of reservoir solution containing 0.3M sodium formate, 0.1M HEPES, 8% PEG 10,000, pH 6.5, and 0.2 uL 30% sodium dextran sulfate Mr=5,000). The droplets were incubated against 500uL reservoir solution for 1-2 days before crystals were observed.

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