6NN7
The structure of human liver pyruvate kinase, hLPYK-GGG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 1 |
Unit cell lengths | 79.365, 106.205, 151.711 |
Unit cell angles | 76.44, 80.06, 71.37 |
Refinement procedure
Resolution | 39.060 - 2.320 |
R-factor | 0.192 |
Rwork | 0.191 |
R-free | 0.25140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ip7 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.252 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.060 | 2.360 |
High resolution limit [Å] | 2.320 | 2.320 |
Number of reflections | 175876 | |
<I/σ(I)> | 12.3 | |
Completeness [%] | 89.4 | |
Redundancy | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.2 M ammonium citrate, pH 6.0, 24% PEG3350 |