6MVY
NavAb voltage-gated sodium channel, residues 1-226, crystallized in the presence of Class 1B Anti-arrhythmic drug Lidocaine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-08 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | I 4 |
Unit cell lengths | 126.596, 126.596, 192.219 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.033 - 3.002 |
R-factor | 0.2055 |
Rwork | 0.204 |
R-free | 0.23720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rvy |
RMSD bond length | 0.007 |
RMSD bond angle | 0.880 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.109 |
High resolution limit [Å] | 3.000 | 3.002 |
Rmerge | 0.120 | |
Number of reflections | 30052 | |
<I/σ(I)> | 24 | |
Completeness [%] | 100.0 | |
Redundancy | 16 | |
CC(1/2) | 0.657 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 1.8 M Ammonium Sulfate 100 mM Sodium Acetate, pH 5.0 10 mM Lidocaine |