6M9K
Crystal structure of lambda exonuclease in complex with the Red beta C-terminal domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-003 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-16 |
Detector | DECTRIS PILATUS3 R 200K-A |
Wavelength(s) | 1.54 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 122.522, 122.522, 147.858 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 106.110 - 2.300 |
R-factor | 0.1982 |
Rwork | 0.195 |
R-free | 0.25350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1avq |
RMSD bond length | 0.009 |
RMSD bond angle | 1.271 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 106.110 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.130 | 0.049 | 0.580 |
Rmeas | 0.149 | 0.053 | 0.747 |
Rpim | 0.071 | 0.021 | 0.460 |
Number of reflections | 57486 | 3065 | 2822 |
<I/σ(I)> | 6.8 | ||
Completeness [%] | 99.7 | 99.3 | 99.1 |
Redundancy | 3.9 | 6.1 | 2.3 |
CC(1/2) | 0.998 | 0.461 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 298 | PEG3350, LISO4, BIS-TRIS |