Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6M6D

Structure of HPPD complexed with a synthesized inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyCCD
Collection date2019-10-20
DetectorADSC QUANTUM 315r
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths76.568, 83.736, 61.960
Unit cell angles90.00, 100.47, 90.00
Refinement procedure
Resolution38.702 - 1.842
R-factor0.1847
Rwork0.183
R-free0.21530
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ywk
RMSD bond length0.007
RMSD bond angle0.903
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.880
High resolution limit [Å]1.8421.842
Rmerge0.1280.488
Number of reflections320071606
<I/σ(I)>8.622.73
Completeness [%]97.0
Redundancy3.3
CC(1/2)0.9890.745
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1M Tris/Bicine pH 8.5, 15% (v/v) MPD, 15% (w/v) PEG 1000, 15% (w/v) PEG 3350, 0.03M NaBr, 0.03M NaF, 0.03M NaI

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon