6M0F
X-ray structure of Drosophila dopamine transporter with subsiteB mutations (D121G/S426M) in substrate-free form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.968 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 97.978, 133.472, 162.088 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.989 - 3.300 |
R-factor | 0.2433 |
Rwork | 0.241 |
R-free | 0.27730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xnx |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.990 | 48.990 | 3.480 |
High resolution limit [Å] | 3.299 | 10.430 | 3.300 |
Rmerge | 0.117 | 0.036 | 1.557 |
Rmeas | 0.129 | 0.040 | 1.729 |
Rpim | 0.054 | 0.018 | 0.737 |
Total number of observations | 5578 | 24848 | |
Number of reflections | 32667 | 1130 | 4644 |
<I/σ(I)> | 9.7 | 33.4 | 1 |
Completeness [%] | 99.7 | 97.5 | 98.8 |
Redundancy | 5.5 | 4.9 | 5.4 |
CC(1/2) | 0.998 | 0.999 | 0.553 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 0.1M MOPS, pH 7.0, 30% PEG 600 |