Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JDQ

Crystal structure of Nme1Cas9 in complex with sgRNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-09-28
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9789
Spacegroup nameP 21 21 21
Unit cell lengths72.080, 122.452, 238.074
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.914 - 2.950
R-factor0.2571
Rwork0.255
R-free0.28960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6jdv
RMSD bond length0.016
RMSD bond angle1.509
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.14_3247: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.000
High resolution limit [Å]2.9502.950
Rmerge0.097
Rmeas0.104
Rpim0.0390.455
Number of reflections459322270
<I/σ(I)>19.91.8
Completeness [%]100.0100
Redundancy7.37.3
CC(1/2)0.9730.619
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION8.52890.1M tris pH 8.5, 0.12M K2SO4, 18.5% PEG 6000

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon