6JDQ
Crystal structure of Nme1Cas9 in complex with sgRNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-28 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9789 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.080, 122.452, 238.074 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.914 - 2.950 |
R-factor | 0.2571 |
Rwork | 0.255 |
R-free | 0.28960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6jdv |
RMSD bond length | 0.016 |
RMSD bond angle | 1.509 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3247: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.000 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.097 | |
Rmeas | 0.104 | |
Rpim | 0.039 | 0.455 |
Number of reflections | 45932 | 2270 |
<I/σ(I)> | 19.9 | 1.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.3 | 7.3 |
CC(1/2) | 0.973 | 0.619 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8.5 | 289 | 0.1M tris pH 8.5, 0.12M K2SO4, 18.5% PEG 6000 |