6IZM
Crystal structure of the PPARgamma-LBD complexed with compound 1l
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E DW |
Temperature [K] | 93 |
Detector technology | IMAGE PLATE |
Collection date | 2008-04-10 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.012, 54.266, 66.727 |
Unit cell angles | 90.00, 92.51, 90.00 |
Refinement procedure
Resolution | 19.680 - 1.800 |
R-factor | 0.225 |
Rwork | 0.223 |
R-free | 0.24800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v9t |
RMSD bond length | 0.004 |
RMSD bond angle | 0.700 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNX |
Refinement software | CNX (2005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 24887 | 2450 |
<I/σ(I)> | 25.8 | 3.56 |
Completeness [%] | 95.3 | 93.9 |
Redundancy | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 295 | PEG 4000, NaSCN, Tris-HCl |