6IJY
Crystal structure of human MTH1(G2K/C87A/C104S mutant) in complex with 8-oxo-dGTP determined using a crystal obtained under microgravity
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-19 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.492, 48.099, 123.936 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.996 - 1.040 |
R-factor | 0.1346 |
Rwork | 0.133 |
R-free | 0.15830 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.008 |
RMSD bond angle | 1.376 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.060 |
High resolution limit [Å] | 1.040 | 1.040 |
Rmerge | 0.109 | 0.900 |
Number of reflections | 131109 | 6458 |
<I/σ(I)> | 65.7 | |
Completeness [%] | 99.9 | |
Redundancy | 12.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | COUNTER-DIFFUSION | 293 | sodium citrate, cacodylate, sodium chloride, glycerol |