6HAY
Crystal structure of PROTAC 1 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-30 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91587 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.725, 117.260, 121.557 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.330 - 2.240 |
R-factor | 0.193 |
Rwork | 0.192 |
R-free | 0.22300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5t35 4qy4 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.070 |
Data reduction software | XDS (Jun 1, 2017) |
Data scaling software | XSCALE (Jun 1, 2017) |
Phasing software | PHASER (2.4.0) |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.330 | 2.370 |
High resolution limit [Å] | 2.240 | 2.240 |
Rmerge | 0.081 | 0.851 |
Rmeas | 0.088 | 0.919 |
Number of reflections | 105978 | 16832 |
<I/σ(I)> | 16.1 | 2 |
Completeness [%] | 99.6 | 97.9 |
Redundancy | 6.97 | 6.94 |
CC(1/2) | 0.999 | 0.810 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.75 | 277 | 18% (w/v) PEG 3350, 0.2 M sodium formate, 0.1 M HEPES, pH 7.75 |