6GVA
CDK2/cyclin A2 in complex with pyrazolo[4,3-d]pyrimidine inhibitor LGR4455
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-31 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 71.015, 112.642, 159.690 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.000 - 2.150 |
R-factor | 0.1966 |
Rwork | 0.194 |
R-free | 0.24030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lmk |
RMSD bond length | 0.013 |
RMSD bond angle | 1.619 |
Data reduction software | XDS (Version Jun 1, 2017 BUILT=20170720) |
Data scaling software | XDS (Version Jun 1, 2017 BUILT=20170720) |
Phasing software | MOLREP (Vers 11.4.06; 24.05.2016) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.000 | 48.000 | 2.280 |
High resolution limit [Å] | 2.150 | 6.390 | 2.150 |
Rmerge | 0.195 | 0.044 | 1.456 |
Rmeas | 0.212 | 0.049 | 1.664 |
Total number of observations | 217234 | ||
Number of reflections | 34773 | 1446 | 5088 |
<I/σ(I)> | 7.96 | 29.97 | 0.86 |
Completeness [%] | 98.3 | 99.2 | 90.3 |
Redundancy | 6.247 | 5.923 | 4.295 |
CC(1/2) | 0.994 | 0.999 | 0.298 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 10% w/v PEG 20000, 20% v/v PEG MME 550, 0.03 M sodium fluoride, 0.03 M sodium bromide, 0.03 M sodium iodide, and 0.1 M bicine/Trizma base, pH 8.5 |