6FZ3
Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and inhibitor bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 110 |
Detector technology | PIXEL |
Collection date | 2016-03-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.976251 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 91.278, 58.000, 153.309 |
Unit cell angles | 90.00, 92.18, 90.00 |
Refinement procedure
Resolution | 50.870 - 2.000 |
R-factor | 0.20057 |
Rwork | 0.199 |
R-free | 0.23492 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6fz5 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.456 |
Data reduction software | XDS (0.5.436) |
Data scaling software | pointless (0.5.436) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.600 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.100 | 0.388 |
Rmeas | 0.129 | 0.498 |
Rpim | 0.080 | 0.308 |
Number of reflections | 46006 | 3522 |
<I/σ(I)> | 4.5 | 2.1 |
Completeness [%] | 84.9 | 89.8 |
Redundancy | 1.9 | 1.9 |
CC(1/2) | 0.981 | 0.806 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 4.5 | 293 | 24% PEG 4000 5 mM NiCl2 0.1 M Na citrate 5% Glycerol |