6FY4
Structure of human NAD(P) H:quinone oxidoreductase in complex with N-(2-bromophenyl)pyrrolidine-1-sulfonamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-01 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0009 |
Spacegroup name | P 31 1 2 |
Unit cell lengths | 121.369, 121.369, 158.252 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.751 - 2.760 |
R-factor | 0.2216 |
Rwork | 0.218 |
R-free | 0.29020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4cet |
RMSD bond length | 0.009 |
RMSD bond angle | 1.210 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 87.560 | 2.890 |
High resolution limit [Å] | 2.760 | 2.760 |
Rmerge | 0.158 | 0.587 |
Rmeas | 0.162 | 0.604 |
Rpim | 0.038 | 0.142 |
Number of reflections | 34531 | 4561 |
<I/σ(I)> | 15.1 | 5.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 18.6 | 17.9 |
CC(1/2) | 0.996 | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.9 | 293 | 0.2 M magnesium chloride hexahydrate, 20% w/v polyethylene glycol 3350, pH 5.9 |