6FT3
Crystal Structure of the first bromodomain of human BRD4 in complex with a 3,5-dimethylisoxazol ligand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.96861 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.549, 44.453, 78.715 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.470 - 1.280 |
R-factor | 0.1488 |
Rwork | 0.147 |
R-free | 0.18450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Ensemble of 2OSS 2ouo 2grc 2oo1 3dai 3d7c 3dwy |
RMSD bond length | 0.016 |
RMSD bond angle | 2.847 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.470 | 29.470 | 1.350 |
High resolution limit [Å] | 1.279 | 4.040 | 1.280 |
Rmerge | 0.083 | 0.056 | 0.522 |
Rmeas | 0.091 | 0.062 | 0.592 |
Rpim | 0.036 | 0.025 | 0.273 |
Number of reflections | 34700 | 1239 | 4872 |
<I/σ(I)> | 10.8 | 9 | 1.4 |
Completeness [%] | 99.6 | 99.7 | 97.3 |
Redundancy | 5.9 | 5.7 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 0.1 M K(citrate) 0.1 M cacodylate pH 6.5 |