6FB6
Crystal Structure of a Tailored I-CreI Homing Endonuclease Protein (3115 variant) in complex with an altered version of its target DNA (Haemoglobin beta subunit gene) at 5NNN region in the presence of Manganese
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-04-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.6 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.176, 67.987, 83.044 |
Unit cell angles | 90.00, 96.45, 90.00 |
Refinement procedure
Resolution | 44.890 - 2.600 |
R-factor | 0.1978 |
Rwork | 0.193 |
R-free | 0.24220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1g9z |
RMSD bond length | 0.003 |
RMSD bond angle | 0.780 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.890 | 2.740 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.110 | 0.540 |
Number of reflections | 28700 | |
<I/σ(I)> | 10.6 | |
Completeness [%] | 96.1 | |
Redundancy | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M calcium acetate, 0.1 M sodium acetate pH 4.6-5.4, 33-40% (v/v) 1,2-propanediol |