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6E6C

HRAS G13D bound to GppNHp (H13GNP)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]173.15
Detector technologyIMAGE PLATE
Collection date2014-03-28
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54178
Spacegroup nameC 1 2 1
Unit cell lengths54.600, 47.753, 57.037
Unit cell angles90.00, 118.31, 90.00
Refinement procedure
Resolution25.100 - 1.900
Rwork0.168
R-free0.23000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3k8y
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0001.930
High resolution limit [Å]1.9005.1501.900
Rmerge0.0880.0580.542
Rmeas0.1040.0690.670
Rpim0.0540.0370.388
Number of reflections9755527405
<I/σ(I)>6.8
Completeness [%]95.098.984.4
Redundancy3.53.42.5
CC(1/2)0.9940.668
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291.15128 mM Calcium acetate, 20.8% PEG 3350, 20% stabilization buffer (20 mM HEPES, 50 mM NaCl, 20 mM MgCl2, at pH 7.5), Crystals were grown in 2uL by 2 uL drops of mother liquor to protein (22 mg/mL), Cryoprotectant: 70% glycerol and 30% mother liquor

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PDB entries from 2024-07-10

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