6E6C
HRAS G13D bound to GppNHp (H13GNP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 173.15 |
Detector technology | IMAGE PLATE |
Collection date | 2014-03-28 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54178 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 54.600, 47.753, 57.037 |
Unit cell angles | 90.00, 118.31, 90.00 |
Refinement procedure
Resolution | 25.100 - 1.900 |
Rwork | 0.168 |
R-free | 0.23000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3k8y |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.150 | 1.900 |
Rmerge | 0.088 | 0.058 | 0.542 |
Rmeas | 0.104 | 0.069 | 0.670 |
Rpim | 0.054 | 0.037 | 0.388 |
Number of reflections | 9755 | 527 | 405 |
<I/σ(I)> | 6.8 | ||
Completeness [%] | 95.0 | 98.9 | 84.4 |
Redundancy | 3.5 | 3.4 | 2.5 |
CC(1/2) | 0.994 | 0.668 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 128 mM Calcium acetate, 20.8% PEG 3350, 20% stabilization buffer (20 mM HEPES, 50 mM NaCl, 20 mM MgCl2, at pH 7.5), Crystals were grown in 2uL by 2 uL drops of mother liquor to protein (22 mg/mL), Cryoprotectant: 70% glycerol and 30% mother liquor |