6E68
NAMPT co-crystal with inhibitor compound 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2016-05-05 |
Detector | NOIR-1 |
Wavelength(s) | 0.9762 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.464, 106.410, 82.745 |
Unit cell angles | 90.00, 96.55, 90.00 |
Refinement procedure
Resolution | 65.054 - 1.500 |
R-factor | 0.1601 |
Rwork | 0.160 |
R-free | 0.16700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o28 |
RMSD bond length | 0.019 |
RMSD bond angle | 1.825 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.054 | 65.054 | 1.580 |
High resolution limit [Å] | 1.500 | 4.740 | 1.500 |
Rmerge | 0.031 | 1.108 | |
Rmeas | 0.139 | 0.036 | 1.368 |
Rpim | 0.074 | 0.019 | 0.789 |
Total number of observations | 555921 | 19749 | 54222 |
Number of reflections | 160628 | 5347 | 19712 |
<I/σ(I)> | 9.3 | 31.6 | 0.9 |
Completeness [%] | 97.0 | 99.4 | 82.2 |
Redundancy | 3.5 | 3.7 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 0.1 M Sodium phosphate, pH 9.0, 28% polyethylene glycol 3350, 0.2 M NaCl |