6DJT
Structure of TYW1 with a lysine-pyruvate adduct bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-08-02 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.260, 80.109, 86.456 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.314 - 1.640 |
R-factor | 0.1697 |
Rwork | 0.168 |
R-free | 0.19540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2z2u |
RMSD bond length | 0.007 |
RMSD bond angle | 0.841 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.700 |
High resolution limit [Å] | 1.640 | 1.640 |
Number of reflections | 47373 | 3369 |
<I/σ(I)> | 30.2 | 2.2 |
Completeness [%] | 94.1 | 68 |
Redundancy | 6.5 | 4.4 |
CC(1/2) | 0.942 | 0.942 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294.15 | 100 mM potassium phosphate monobasic /sodium phosphate dibasic pH 6.2, 10% (w/v) PEG 3000 |