6DGX
Crystal structure of HIV-1 Protease NL4-3 WT in complex with darunavir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-01 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.005, 58.298, 61.931 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.469 - 2.001 |
R-factor | 0.1936 |
Rwork | 0.192 |
R-free | 0.22780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ll3 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.590 |
Data scaling software | HKL-3000 (703x) |
Phasing software | PHASER |
Refinement software | PHENIX (1.12-2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 26.469 | 2.155 |
High resolution limit [Å] | 2.001 | 2.001 |
Number of reflections | 12758 | |
<I/σ(I)> | 17.5 | |
Completeness [%] | 98.1 | |
Redundancy | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 23-24% (w/v) Ammonium Sulfate, 0.1M Bis-Tris-Methane-HCl Buffer pH 5.5 |