6DFY
Remodeled crystal structure of DNA-bound DUX4-HD2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-15 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.9747 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 51.610, 51.610, 166.550 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.297 - 2.623 |
R-factor | 0.2475 |
Rwork | 0.246 |
R-free | 0.27940 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5z2t |
RMSD bond length | 0.006 |
RMSD bond angle | 0.973 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((dev_3139: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 83.300 | 2.760 |
High resolution limit [Å] | 2.620 | 2.620 |
Rmerge | 1.500 | |
Number of reflections | 7363 | 1026 |
<I/σ(I)> | 11.5 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 9.5 | 9.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG8000 |