6CK8
Crystal structure of anti-influenza single-domain llama antibody SD38
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03320 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 118.018, 75.267, 57.250 |
Unit cell angles | 90.00, 92.62, 90.00 |
Refinement procedure
Resolution | 43.007 - 2.050 |
R-factor | 0.1786 |
Rwork | 0.177 |
R-free | 0.21110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4grw |
RMSD bond length | 0.002 |
RMSD bond angle | 0.668 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.090 |
High resolution limit [Å] | 2.050 | 2.050 |
Rpim | 0.030 | 0.140 |
Number of reflections | 30303 | 1084 |
<I/σ(I)> | 27.3 | 3.5 |
Completeness [%] | 96.0 | 70 |
Redundancy | 4.9 | 2.8 |
CC(1/2) | 1.000 | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295 | 0.085 M HEPES, pH 8.5, 1.4 M ammonium sulfate, 1.7%(v/v) PEG400, 15% glycerol |