6CFN
Crystal Structure of the DNA-free Glucocorticoid Receptor DNA Binding Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-03-03 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 |
Unit cell lengths | 65.803, 65.432, 72.659 |
Unit cell angles | 71.27, 84.96, 68.44 |
Refinement procedure
Resolution | 36.042 - 2.500 |
R-factor | 0.1973 |
Rwork | 0.195 |
R-free | 0.24830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hn5 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.159 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmeas | 0.180 | 0.650 |
Rpim | 0.100 | 0.460 |
Number of reflections | 33141 | 2095 |
<I/σ(I)> | 14.5 | 1.3 |
Completeness [%] | 89.5 | 56.9 |
Redundancy | 2.4 | 1.4 |
CC(1/2) | 0.560 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 25% PEG3350, 50 mM Tris pH8.5, and 200 mM di-sodium tartrate |