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6C2I

Structure of Bace-1 (Beta-Secretase) in complex with : N-(3-((1R,5S,6R)-3-amino-5-methyl-2-oxa-4-azabicyclo[4.1.0]hept-3-en-5-yl)-4-fluorophenyl)-5-methoxypyrazine-2-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E DW
Temperature [K]95
Detector technologyIMAGE PLATE
Collection date2012-08-29
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 61 2 2
Unit cell lengths101.952, 101.952, 172.155
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.990 - 1.950
R-factor0.1588
Rwork0.158
R-free0.18380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1w50
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.020
High resolution limit [Å]1.9504.2001.950
Rmerge0.1010.0580.550
Total number of observations195842
Number of reflections3523841802042
<I/σ(I)>11.3
Completeness [%]89.697.953.1
Redundancy5.65.34.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29320 % (w/v) PEG 5000 monomethylethyl ether (MME), 200 mM sodium citrate (pH 6.6) and 200 mM sodium iodide

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