6BRU
Crystal Structure of the Human vaccinia-related kinase bound to a (S)-2-phenylaminopteridinone inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-28 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979180 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 92.755, 97.138, 193.651 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.910 - 1.800 |
R-factor | 0.19558 |
Rwork | 0.195 |
R-free | 0.21426 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3op5 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.517 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.910 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.119 | 1.438 |
Rpim | 0.074 | 0.903 |
Number of reflections | 162036 | 7946 |
<I/σ(I)> | 8.9 | 1.1 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.9 | 6.7 |
CC(1/2) | 0.997 | 0.575 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 22% PEG3350, 0.02M Lithium Sulfate, 0.1M Buffer system SBG pH 7.0 |