6ATB
Crystal Structure of human NAMPT in complex with NVP-LOD812
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-02-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 98.460, 208.400, 98.860 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 104.200 - 2.530 |
R-factor | 0.1555 |
Rwork | 0.152 |
R-free | 0.21470 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3dgr |
RMSD bond length | 0.010 |
RMSD bond angle | 1.160 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | BUSTER |
Refinement software | BUSTER (2.11.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 207.990 | 2.670 |
High resolution limit [Å] | 2.530 | 2.530 |
Rmerge | 0.142 | 0.476 |
Number of reflections | 77346 | |
<I/σ(I)> | 8.6 | 3.2 |
Completeness [%] | 99.8 | 99.9 |
Redundancy | 6 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 294 | 18 % (v/v) glycerol 23 % (w/v) PEG 3350 200 mM NaCl 100 mM Tris/HCl pH 8.0 |