6AT9
Crystal structure of an anaplastic lymphoma kinase-derived neuroblastoma tumor antigen bound to the Human Major Histocompatibility Complex Class I molecule HLA-A*0101
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 77 |
Detector technology | PIXEL |
Collection date | 2017-08-01 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.12 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 81.410, 81.410, 118.281 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.310 - 2.950 |
R-factor | 0.2324 |
Rwork | 0.224 |
R-free | 0.30730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1w72 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.720 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.310 | 3.130 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.094 | 0.770 |
Number of reflections | 9982 | 1590 |
<I/σ(I)> | 16.2 | 3 |
Completeness [%] | 99.8 | 99.4 |
Redundancy | 8.3 | 7.9 |
CC(1/2) | 0.998 | 0.876 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.18M MgCl2, 0.1M Na-HEPES(7.5),27%PEG400, 10%Glycerol |