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6AJJ

Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with ICA38

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97891
Spacegroup nameP 21 21 21
Unit cell lengths87.386, 139.731, 140.713
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.466 - 2.794
R-factor0.2198
Rwork0.218
R-free0.25270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ajf
RMSD bond length0.006
RMSD bond angle0.918
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.850
High resolution limit [Å]2.7947.5902.800
Rmerge0.0790.0340.962
Rmeas0.0820.0361.000
Rpim0.0230.0100.271
Number of reflections4339823642130
<I/σ(I)>4.6
Completeness [%]100.099.7100
Redundancy13.111.513.3
CC(1/2)0.9990.900
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP28910%-20% (v/v) polyethylene glycol monomethyl ether 350 (PEGMME 350), 50 mM ADA (N-(2-Acetamido) iminodiacetic acid) (pH 6.0-7.0), 7.5%-17.5% (v/v) polyethylene glycol 2000 (PEG 2000)

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PDB entries from 2024-07-17

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