6YK5
Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-(2'-Amino-2'-carboxyethyl)-5,7-dihydrofuro[3,4-d]- pyrimidine-2,4(1H,3H)-dione at resolution 1.15A
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | MAX II BEAMLINE I911-3 |
| Synchrotron site | MAX II |
| Beamline | I911-3 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-05-14 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 59.075, 96.331, 48.522 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 26.778 - 1.150 |
| R-factor | 0.1108 |
| Rwork | 0.110 |
| R-free | 0.13010 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1syh |
| Data reduction software | XDS |
| Data scaling software | SCALA (3.3.9) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.212 | 26.778 | 1.210 |
| High resolution limit [Å] | 1.150 | 3.640 | 1.150 |
| Rmerge | 0.035 | 0.385 | |
| Rmeas | 0.069 | 0.040 | 0.452 |
| Rpim | 0.032 | 0.019 | 0.231 |
| Total number of observations | 450981 | 15244 | 44337 |
| Number of reflections | 97655 | 3359 | 12982 |
| <I/σ(I)> | 14.2 | 35.7 | 3.2 |
| Completeness [%] | 98.6 | 99 | 90.7 |
| Redundancy | 4.6 | 4.5 | 3.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 279 | PEG4000, lithium sulfate, acetate |






