6Y4Y
The crystal structure of human MACROD2 in space group P41212
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-27 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9762 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 95.650, 95.650, 258.720 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.830 - 1.750 |
R-factor | 0.2055 |
Rwork | 0.204 |
R-free | 0.22740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4iqy |
RMSD bond length | 0.007 |
RMSD bond angle | 1.439 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.830 | 47.830 | 1.800 |
High resolution limit [Å] | 1.750 | 7.830 | 1.750 |
Rmerge | 0.107 | 0.068 | 1.542 |
Rmeas | 0.112 | 0.072 | 1.613 |
Total number of observations | 1472885 | ||
Number of reflections | 121564 | 1572 | 8864 |
<I/σ(I)> | 13.27 | 32.26 | 1.7 |
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 12.116 | 10.402 | 11.75 |
CC(1/2) | 0.998 | 0.998 | 0.709 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 293 | 0.2 M Ammonium tartarate dibasic pH 6.7, 20% PEG 3350 |