6Y4Y
The crystal structure of human MACROD2 in space group P41212
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0015035 | molecular_function | protein-disulfide reductase activity |
A | 0015036 | molecular_function | disulfide oxidoreductase activity |
A | 0030337 | molecular_function | DNA polymerase processivity factor activity |
A | 0045454 | biological_process | cell redox homeostasis |
B | 0005515 | molecular_function | protein binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0015035 | molecular_function | protein-disulfide reductase activity |
B | 0015036 | molecular_function | disulfide oxidoreductase activity |
B | 0030337 | molecular_function | DNA polymerase processivity factor activity |
B | 0045454 | biological_process | cell redox homeostasis |
C | 0005515 | molecular_function | protein binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0015035 | molecular_function | protein-disulfide reductase activity |
C | 0015036 | molecular_function | disulfide oxidoreductase activity |
C | 0030337 | molecular_function | DNA polymerase processivity factor activity |
C | 0045454 | biological_process | cell redox homeostasis |
D | 0005515 | molecular_function | protein binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0015035 | molecular_function | protein-disulfide reductase activity |
D | 0015036 | molecular_function | disulfide oxidoreductase activity |
D | 0030337 | molecular_function | DNA polymerase processivity factor activity |
D | 0045454 | biological_process | cell redox homeostasis |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | binding site for residue TLA B 301 |
Chain | Residue |
B | TRP11 |
B | ARG12 |
B | LYS15 |
B | HOH462 |
D | TRP11 |
D | ARG12 |
D | LYS15 |
D | HOH340 |
Functional Information from PROSITE/UniProt
site_id | PS00194 |
Number of Residues | 19 |
Details | THIOREDOXIN_1 Thioredoxin family active site. LVdFWaeWCGPCKmIapiL |
Chain | Residue | Details |
A | LEU-88-LEU-70 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 8 |
Details | ACT_SITE: Nucleophile |
Chain | Residue | Details |
B | CYS-80 | |
B | CYS-77 | |
C | CYS-80 | |
C | CYS-77 | |
D | CYS-80 | |
D | CYS-77 | |
A | CYS-80 | |
A | CYS-77 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | SITE: Deprotonates C-terminal active site Cys |
Chain | Residue | Details |
B | ASP-86 | |
C | ASP-86 | |
D | ASP-86 | |
A | ASP-86 |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | SITE: Contributes to redox potential value |
Chain | Residue | Details |
B | GLY-79 | |
B | PRO-78 | |
C | GLY-79 | |
C | PRO-78 | |
D | GLY-79 | |
D | PRO-78 | |
A | GLY-79 | |
A | PRO-78 |
site_id | SWS_FT_FI4 |
Number of Residues | 4 |
Details | MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842 |
Chain | Residue | Details |
B | LYS-43 | |
C | LYS-43 | |
D | LYS-43 | |
A | LYS-43 |
site_id | SWS_FT_FI5 |
Number of Residues | 20 |
Details | BINDING: BINDING => ECO:0000269|PubMed:23474712 |
Chain | Residue | Details |
A | PHE224 | |
B | GLY77 | |
B | ALA90 | |
B | GLY97 | |
B | ILE185 | |
B | PHE224 | |
C | GLY77 | |
C | ALA90 | |
C | GLY97 | |
C | ILE185 | |
C | PHE224 | |
D | GLY77 | |
D | ALA90 | |
D | GLY97 | |
D | ILE185 | |
D | PHE224 | |
A | ALA90 | |
A | GLY97 | |
A | ILE185 | |
A | GLY77 |
site_id | SWS_FT_FI6 |
Number of Residues | 8 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:18655026 |
Chain | Residue | Details |
B | LYS170 | |
C | LYS170 | |
D | LYS170 | |
A | LYS170 |