6WWB
Crystal Structure of the second bromodomain of human BRD2 in complex with the compound 3b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-06-01 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 52.377, 71.664, 31.944 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.940 - 1.310 |
R-factor | 0.1254 |
Rwork | 0.124 |
R-free | 0.14620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ddj |
RMSD bond length | 0.008 |
RMSD bond angle | 1.057 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.340 |
High resolution limit [Å] | 1.310 | 1.310 |
Rmerge | 0.031 | 0.126 |
Rmeas | 0.033 | 0.137 |
Rpim | 0.013 | 0.051 |
Number of reflections | 29680 | 1800 |
<I/σ(I)> | 61.1 | 14.5 |
Completeness [%] | 99.8 | 100 |
Redundancy | 7.1 | 7 |
CC(1/2) | 0.994 | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | HEPES, PEG 400 |