6WMN
Human poly-N-acetyl-lactosamine synthase structure demonstrates a modular assembly of catalytic subsites for GT-A glycosyltransferases
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-27 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.00 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 67.210, 79.810, 157.790 |
Unit cell angles | 90.00, 97.89, 90.00 |
Refinement procedure
Resolution | 44.070 - 2.040 |
R-factor | 0.2187 |
Rwork | 0.218 |
R-free | 0.23210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wmm |
RMSD bond length | 0.004 |
RMSD bond angle | 0.564 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.070 | 44.070 | 2.090 |
High resolution limit [Å] | 2.040 | 9.120 | 2.040 |
Rmerge | 0.088 | ||
Rmeas | 0.095 | 0.038 | |
Total number of observations | 790241 | ||
Number of reflections | 105155 | 1235 | 7723 |
<I/σ(I)> | 13.89 | 51.2 | 0.99 |
Completeness [%] | 99.8 | 97.9 | 99.4 |
Redundancy | 7.515 | 6.773 | 7.29 |
CC(1/2) | 0.999 | 0.997 | 0.511 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 11% PEG3350, 12% Ethylene glycol, 100 mM Hepes pH 7.5 |