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6W3Z

Crystal Structure of Brugia malayi Deoxyhypusine synthase (DHPS)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.96858
Spacegroup nameP 1 21 1
Unit cell lengths69.753, 136.320, 75.883
Unit cell angles90.00, 92.92, 90.00
Refinement procedure
Resolution29.410 - 2.300
R-factor0.1894
Rwork0.188
R-free0.21570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1rqd
RMSD bond length0.004
RMSD bond angle1.259
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.42029.4102.360
High resolution limit [Å]2.30010.2902.300
Rmerge0.1290.0340.880
Rmeas0.1550.0401.048
Rpim0.0840.0220.563
Total number of observations212915458
Number of reflections625476904609
<I/σ(I)>5.416.71.1
Completeness [%]99.694.699.7
Redundancy3.33.13.4
CC(1/2)0.9920.9960.565
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29320% PEG3350 0.2M ammonium citrate dibasic

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PDB entries from 2024-05-15

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