Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VZI

Crystal Structure of HIV-1 CAP256 RnS-3mut-2G-SOSIP.664 Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2018-10-13
DetectorRAYONIX MX300-HS
Wavelength(s)1
Spacegroup nameP 63
Unit cell lengths133.920, 133.920, 315.110
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution43.836 - 2.716
R-factor0.2318
Rwork0.229
R-free0.27550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6mtj
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.800
High resolution limit [Å]2.7005.8102.700
Rmerge0.1280.0662.067
Rmeas0.1380.0702.368
Rpim0.0490.0241.122
Total number of observations383837
Number of reflections5371684931231
<I/σ(I)>5.5
Completeness [%]63.398.914.6
Redundancy7.18.53.2
CC(1/2)0.9900.113
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION29860 mM sodium acetate pH 4.6, 120 mM ammonium sulfate and 6.3% PEG 4,000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon