6VXR
Structure of Maternal embryonic leucine zipper kinase bound to LDSM276
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96858 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.124, 70.159, 102.067 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.840 - 2.100 |
R-factor | 0.2206 |
Rwork | 0.219 |
R-free | 0.24830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ih9 |
RMSD bond length | 0.004 |
RMSD bond angle | 1.215 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.850 | 19.840 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.095 | 0.060 | 2.679 |
Rmeas | 0.099 | 0.063 | 2.788 |
Rpim | 0.028 | 0.019 | 0.764 |
Total number of observations | 3223 | 24678 | |
Number of reflections | 25981 | 311 | 1871 |
<I/σ(I)> | 13.6 | 41.9 | 1.1 |
Completeness [%] | 99.9 | 91.2 | 100 |
Redundancy | 12.8 | 10.4 | 13.2 |
CC(1/2) | 0.999 | 0.998 | 0.506 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 25% PEG 1,500 |