6TDC
PPAR gamma ligand binding domain in complex with MRL-871
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.033210 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 93.142, 93.142, 130.574 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.571 - 2.328 |
R-factor | 0.2027 |
Rwork | 0.201 |
R-free | 0.23870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6fzp |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 130.570 | 2.410 |
High resolution limit [Å] | 2.328 | 2.330 |
Rmerge | 0.063 | |
Rmeas | 0.068 | |
Rpim | 0.025 | |
Number of reflections | 22319 | 293 |
<I/σ(I)> | 16.6 | |
Completeness [%] | 82.1 | |
Redundancy | 7.1 | |
CC(1/2) | 0.999 | 0.632 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.2 M Ammonium Nitrate, 20% w/v PEG3350 |