6RCG
Crystal structure of Casein kinase 1 delta (CK1 delta) complexed with SR3029 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-03 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.040, 53.550, 72.170 |
Unit cell angles | 90.00, 113.45, 90.00 |
Refinement procedure
Resolution | 29.630 - 1.400 |
R-factor | 0.1442 |
Rwork | 0.142 |
R-free | 0.18540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hnf |
RMSD bond length | 0.016 |
RMSD bond angle | 1.656 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 66.209 | 29.631 | 1.480 |
High resolution limit [Å] | 1.400 | 4.430 | 1.400 |
Rmerge | 0.040 | 0.462 | |
Rmeas | 0.060 | 0.047 | 0.546 |
Rpim | 0.031 | 0.024 | 0.286 |
Number of reflections | 58592 | 1978 | 8620 |
<I/σ(I)> | 12 | 29.4 | 2.4 |
Completeness [%] | 96.7 | 98.7 | 97.5 |
Redundancy | 3.6 | 3.9 | 3.5 |
CC(1/2) | 0.998 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 20% PEG3350, 0.1M succinic acid |