Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QZW

DPP8 bound to a dipeptide (MP) from the N-terminus of BRCA2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-09-12
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)1.00000
Spacegroup nameC 2 2 21
Unit cell lengths162.730, 246.074, 261.812
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.580 - 3.200
R-factor0.18599
Rwork0.184
R-free0.22478
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6eoo
RMSD bond length0.003
RMSD bond angle0.984
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0232)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.5803.280
High resolution limit [Å]3.2003.200
Rmerge0.1341.310
Number of reflections865596331
<I/σ(I)>17.21.8
Completeness [%]99.9
Redundancy8.37
CC(1/2)0.9900.730
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.7527710 mg/ml of protein, 0.46 M Na citrate. Drops are set in a 1:1 ratio

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon