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6QU9

Fab fragment of an antibody that inhibits polymerisation of alpha-1-antitrypsin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2018-04-21
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9763
Spacegroup nameP 21 21 21
Unit cell lengths79.268, 105.102, 105.128
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution63.287 - 1.900
R-factor0.2034
Rwork0.202
R-free0.23280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Model generated using RosettaAntibody protocol
Data reduction softwareXDS (20180126)
Data scaling softwareAimless (0.6.2)
Phasing softwarePHASER (2.8.1)
Refinement softwarePHENIX (1.14-3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]105.100105.1001.940
High resolution limit [Å]1.9009.1101.900
Rmerge0.0820.0520.845
Rmeas0.0900.0580.919
Rpim0.0360.0250.359
Number of reflections698627464469
<I/σ(I)>9.820.91.6
Completeness [%]99.999.599.9
Redundancy6.35.26.5
CC(1/2)0.9970.9960.792
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52930.1M Bis-Tris pH 5.5, 25% PEG 3350, 0.2M ammonium sulfate

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PDB entries from 2024-05-15

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