6Q36
TEAD4(216-434) complexed with optimized peptide 9 and myristoate (covalently bound) at 2.01A resolution: Structure-based design of potent linear peptide inhibitors of the YAP-TEAD protein-protein interaction derived from the YAP omega-loop sequence
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00004 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 172.868, 40.438, 98.034 |
Unit cell angles | 90.00, 93.44, 90.00 |
Refinement procedure
Resolution | 19.800 - 2.010 |
R-factor | 0.2179 |
Rwork | 0.217 |
R-free | 0.24380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6q2x |
RMSD bond length | 0.008 |
RMSD bond angle | 1.120 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.800 | 2.062 |
High resolution limit [Å] | 2.010 | 2.010 |
Rmerge | 0.056 | 0.538 |
Rmeas | 0.067 | 0.650 |
Number of reflections | 45287 | |
<I/σ(I)> | 12.1 | 2.1 |
Completeness [%] | 99.0 | 94.8 |
Redundancy | 3.3 | 3 |
CC(1/2) | 0.997 | 0.755 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | 0.9 M NaK Phosphate |