6OD5
Human TCF4 C-terminal bHLH domain in Complex with 12-bp Oligonucleotide Containing E-box Sequence with 5-carboxylcytosines
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-16 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 |
Unit cell lengths | 44.677, 44.757, 54.640 |
Unit cell angles | 78.63, 78.88, 79.27 |
Refinement procedure
Resolution | 36.661 - 2.050 |
R-factor | 0.2364 |
Rwork | 0.234 |
R-free | 0.28030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ql2 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.552 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.661 | 2.120 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.263 | 0.554 |
Rpim | 0.138 | 0.412 |
Number of reflections | 24281 | 2094 |
<I/σ(I)> | 5.4 | |
Completeness [%] | 96.5 | 82.8 |
Redundancy | 3.6 | 2.2 |
CC(1/2) | 0.361 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 292 | 30% PEG4000, 0.1 M Tris, pH 8.5, 0.2 M lithium sulfate monohydrate or 0.2 M sodium acetate trihydrate |