6O3R
Crystal Structure of NDM-1 D199N with Compound 7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-12-12 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.663, 60.219, 42.504 |
Unit cell angles | 90.00, 97.98, 90.00 |
Refinement procedure
Resolution | 21.848 - 1.300 |
R-factor | 0.1542 |
Rwork | 0.153 |
R-free | 0.18070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4tzf |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.14_3228) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.320 |
High resolution limit [Å] | 1.300 | 3.530 | 1.300 |
Rmerge | 0.043 | 0.023 | 0.269 |
Rmeas | 0.050 | 0.028 | 0.328 |
Rpim | 0.026 | 0.015 | 0.184 |
Total number of observations | 188121 | ||
Number of reflections | 51215 | 2582 | 2520 |
<I/σ(I)> | 11.9 | ||
Completeness [%] | 99.9 | 98.1 | 99.8 |
Redundancy | 3.7 | 3.6 | 3 |
CC(1/2) | 0.998 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.05 M Potassium Phosphate (Di Basic), 0.01 M Calcium Chloride, 25%(w/v) PEG-8000 |